Browse of TCMCG007C35018 protein

CDS

Accession Number	TCMCG007C35018
gbkey	CDS
Protein Id	XP_009147511.2
Location	complement(join(421451..422058,422145..422510,422603..423674,423769..424064,424140..424218,424332..424419,424570..424687,424800..424977,425096..426436,426627..426769,426850..426898,426974..427187,427346..427405,427698..428009,428130..428208,428562..428641,428725..428802,428948..429025,429100..429187,429274..429360,429434..429573,429645..429718,429860..429883))
Gene	LOC103871044
GeneID	103871044
Organism	Brassica rapa

Protein

Length	1883aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA249065
db_source	XM_009149263.3
Definition	mediator of RNA polymerase II transcription subunit 13 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category	K
Description	Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K15164        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04919        [VIEW IN KEGG] map04919        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005215        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008643        [VIEW IN EMBL-EBI] GO:0015144        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016021        [VIEW IN EMBL-EBI] GO:0022857        [VIEW IN EMBL-EBI] GO:0031224        [VIEW IN EMBL-EBI] GO:0034219        [VIEW IN EMBL-EBI] GO:0040034        [VIEW IN EMBL-EBI] GO:0044425        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050793        [VIEW IN EMBL-EBI] GO:0051119        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051239        [VIEW IN EMBL-EBI] GO:0055085        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0071702        [VIEW IN EMBL-EBI] GO:0090213        [VIEW IN EMBL-EBI] GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTGGACCAATGTCTTCAGAATTGGGGGTCTTCATCACGTTTCTTGGTTTCAGTTTCTTCCTAGTGAAGCTGAGCTCAATCCCACCTCTGATACAAGTTCAAGAGCTGAGCAGAATGACGTTGCAACATATCTTGTGCTTTCATCTCATCTGCGCTTGCAGAAGGAAGGCTTTCTTAGCACATGGACCAATTCTTTCGTTGGACCTTGGGATCCATCTCAAGGCTTATACAACCCTGATGAGAAGATCAAGCTTTGGCTTTTTCTTCCTGGACGTCATTCATCAATCACTGATAAAGCTCAGGCTGCTGTCTCAAAGCTTAGAGTTGTTGCGTCAGGAATCTGGGTAGCACCTGGGGACTCCGAGGAGATATCTGTTGCCTTTTCACAGTCTTTGCGTAATTGCATTGAAAGAGCGTTAAGTGGACTTTCTTACATGAGATTTGGAGATGTGTTTTCAAAAGTCAGCCCTCAAAATGAAGAATATTTGAGGAGGGGCCGTCTTACTGTTGAATTCGTTTTTGCTGCTACCGAAGAGGCAGTTTTTGTCCATGTCATTGTTTCTGCCAAGAATGTACGGACACTTTCAAGTGGCGATGCTGAGAGGCTGTCAAGGAGTTCCTTGAAAAACTCCAGTTATAGGCTTCCAGTGATTGTTTCTCCTCATGGAATGCGGGGTAGCCTCACTGGATTCTGTCCCAATGACCTTGTCAAGCAAGTCTACTTCAGTTCTGGAAACTTAAGGTCTTCAAGTGGGTATATTGGCCTCCCTCCTCATGCTGGTAGTGGGTCCCGTCTGATAAATGGCGATCATTGTTACGTGGAAGTTACACTTGGTTGCTGCCAAAATATAAATGACAACACAAGTCAAACTAATTCAACCTTTGCGGTGAATGTTCCTCAAACATCAGTTGGGAGTAAAGATCACCGGAAAGGACACCCAGATATAGCATCGATGTGTGAAAAAAAGTTCATATATCCAGCTGAGGCCGTGCTTGTGCCAATTTTACAGTCGGCATTTGCTAAATTTTCTTTGAAAAGATTTTGGCTTCAAAACTGGATAGGACCATCTCTAGCAGGCTCATCGTTATTTATGCACTGGGCTGGTGATTTTGACTTCTTTGGATCGTCTGGAAATAAGAGTGATGGGTTCTTTGAAAAAAATGGCTATAATAGCAGTGGCAGTAGCGGTAATAGCAGCATTAGTTCAACAAGTAGTGCTTCTAGTGGGAGTGGTTGGAGAATGACTTCAAGAACTGGTGACCTTGATGCGGATGCAGATTCTTTGACTTGTAATGATGATCACCCAAAATTGGGTTCCAAGCGGCCGCGAACAGGGATGGCAGAGTCATTCGGTCAAGTAGGTACTGCAAATGATCAATTTGGTTGGGATTGGGATGATGACGATGATGATGATAGAGGAGTTGGCATGGATATCCAAGCACTTCTTTCAGAGTTTGGAGACTTTGGTGACTTCTTTGAGAATGATGCGTTACCTTTTGGCGAGCCGCCGGGAACAGCAGAGTCGCATTCCCTCATACTTCCTTCAGATTCTGCTGATGTAGGTTCTAGTCCAATGGATACGATGGATGTATCAGACCAGATTGTGTTGCCCGTTGGGTTTTCGTCTTTTGAGAGCTTCAATCCTGCTCCCCCTATCATTGATGAAGGCCTTATCAAAAGTCAAGAAGTCCTCAACAACAGTGTCACTTCAGTTTCAGCTCCTTCTAATCAAATGTTAAGCTCTTCTAACAGTGAGTTCGATCATTTGATGAAAGCAGAAGCTATGATGACCTTTGCTCCTGAGTATGGAGCTGTTGAAGCACCTATGAGCGAGATTTCTTCGACGTCTTTCAAAAGCCCATATCTTCCCAAATCTCATAAAGTGGAGAGTTCAAATTCAAGAACGAGTAGCTATGTTTATGGACCCACCCCACCTGCCACTGATTCTGATGGAGCAGTCGATAAGATTTTGCTTGGATCAAAAGCATACATTGGTAATGATGGCAGAACTTTGTACACTAAGGTAGAGGGCAGAAAGGGCCGGTATGATAAGCTACCTACTTTAATCAGTGACAACAATAGTAAAAAGGAGGGTGTGTCTCAGTTAAAATATTCAAACTACAATGCTTCTAGTGCTGTTAAGATCGTACAGGGGAAAAAGACTGACGGTATATCTGCTGTTGTTAGTACTTTATTATCTTCAAAGACCTTGCTGGCAACAGACGTGGGAAGCGTTATGTTCCAAGCCTTCATGTATAGGATGCGGCACAAAGCCATTTCTTCGAAGCACAGTTCTCCTGTTAGTCTGAGTAGGCTTAGTGGAAACTTCTTCCTGAACCAGGTGCCAAATGAGCCAAGTAGTCTGACAGACAACGTATCTGGAAGGAACGAGATATATAAGAAAGAAGTACCTACTAGAATAGCTGGAGATTTCGATGGAGGAATGTTAGACAGCCACATGAGTGCACCAGTTGGCGTGTGGCGGACTGTTTCAGTCCCAAAAACAGCAAAACCTGCTAGCTCGCCAAACATTGAAGCAGGCTCATCCTTGCCCCATAGTTCATTTAGCGAAAACAGTTTGCTTTCTTATGGACAAAGGCAGCCATTGCAGGAGCTTCTAGATGGAATAGCGCTACTTGTACAGCAAGCTACTTCTTTCGTTGATTTAGCTCTGGATTCAGATTGTGGGGATGGACCTTATGGCTGGCTTGCACTGGAAGAGTTGTGGAGACGGGAACTGTCGTGTGGACCCTCTGCTGGCCATGCAGGCTGTGGGGGAACTTTGGCTTCCTGCCATTCTCTGGACATTGCTGGTGTCAAGCTAGTTGACCCACTCTCTGCTGAGGTTTTTCCTTCCTCTGTCATTACTCTACTGCAATCTGACATCAAGACAGCTCTGAAATCCGCATTTGGTCAGTCAGACGGCCCATTATATGTCACAGATTGGTGCAAGGGCCGAAATCAATCGATGGATGGAGTATCTATTTCCGAGGGATCTACTGCCGAGTCAGTCCTGAGTGAAGTGTCAAATGCAATAGATGGTGGGAAAGGAGAGGAGTCTGCTCAGAGCCAAGATATATACAGTTCAGAGTTACTCCGACCTACACTTTTTGTTCTTCCATCACCCTCTATACTTGTCGGATACCAAGATGACTGGCTTAAGGTTTCAACCAACTCCTTGCCACATTGGGAAAAGGCCCCTTTCGAGCCATATGCTTTGCCGAAAAATATGAACTATACTGTTGTATGCCCGGATATAGATCCTTTAACCAGTGCTGCTGTTGATTTCTTCCAACAACTTGGAACTGTTTATGAAACGTGCAGACTGGGAACCCATTTGCCACAGATCCTAGGAAATCAAATGGAAACTGACGCTGGAAGATTATCCTCGTCAGGATTTGTTCTGCTTGATTGCCCTCAATCGATGAAGATTGAAAGCAATAACACGTCGCTTCTGGGATCTCTCAGTGATTATTTTCTCTCCTTGTCGAATGGGTGGAATGTAAATAGCTATCTGAAGTCTTTGTCAAAAGCGCTGAAAGGTCTTAAGCTTGGGTCTGGGCTTTACACAAACCAGAAAGAAGGGTCAGCTACTCCATGCATGGTAGTGTACATAGTGTGTCCATTTCCCGACCCTTCGGCAGTTTTAAGGACAGTCGTTGAATCGTCTATAGCACTTGGATCAGGGATAAAGCCAGATAGAGACAGGAGATCGTTACTTAATAGTCAGGTTGCAAGGGCATTTGGTAGTTCTGCTGCTGTAGACGAAGCATCAATATCTCACATTCCAGTGCTTTCGGGGTTTAGCGTCCCTAAGCTAGTTCTACAAGTGGTGTCTGTTGATTCTATTTTCCGGATAACAAGTCCAAGCTTTAATGAGCTTGTCATCCTCAAGGATACTGCCTTTTCTGTCTACAATAAAGCTCGGCGAATTTCAAGAGGAATGCCTAATGATGCATTTCTCTCATCATCATTATCTAACAGATCCTCTTCAGCCTTGGCTTCAGTGAATTCTATCTCAGGAATCTGGAAAGACTGCGTCAGTTCTCGAATGACAGGTTCTACACATCCAAGAGATGGTGATATTGATGGTAGCATTAGAACGAGTAGTTGGGATAGTAGCTGGCAAATAACAAGATCTGGAGGAGTAAGCTGCGACTCAAACAGAAATGGAGATTTTTACATTAATGAGGAAATTTTCTATCTATTTGAACCGCTTTTCATCCTTTCCGAGCCTGGTTCCGTGGATCGTGGAGTTTCACCTACTTTCGGCGGCTTAGGATCCGAGTCTTCAAAGCCAATACCTGAGGATGGTGGCAGAGGTTCAGGACTTGGCGTCAATTCAATGGAAGGTACAAGCTCCCAGGGGGATGCATCACAGGTTGAAGGGAAGGCTGTTCCAAGCTTACATTGCTGCTACGGTTGGACAGAGGACTGGAGATGGCTTGTAAGCATCTGGACTGACGCCAGGGGTGAATTGCTTGACACACATATATTCCCCTTTGGTGGGATTAGCAGTAGACAGGATACGAAAGGGCTGCAGTGTCTTTTTGTTCAAGTTCTGCAGCAGGGATGTCAGATACTACAGGCATGTTCCTCCCCTGACAGTGGATCTTTCAAACCCAGGGATTTTGTCATTACACGCATTGGGAGTTTCTTTGAGCTTGAGTACCTAGAGTGGCAAAAGGCAATTTACACAGCTGGAGGTCCTGAGATTAAGAAGTGGCCTATTCAACTTCGACGTTCTGCACCTTCTGGCGTAGCCACCAATAGCAACGGACCTTCCTTGCAACAGCATGATCTGAGTTTGATTCAGGAGAGAGCCTCGTCAACTAGCACACTCTATGGCTCTCACTCAAAACCATCCACCTTTGTGAAAGGCGGTATGGGGCACTCTGCTGGAAGAAAGCAAACAATGGGTGGACAAACCATTTCTGGTACTCCAAGGGGTTTGTTTCAGTGGGTTCACAGCATCAGTTTTGCTTCTATTTCACTTGATCATTCTCTGCATTTTGTTCTTCCGGCTGAGTTGGTATCTCCTGGAGGTGGCCAGAGCAGTACTGGTATGAGTGCAGCAAATTACATTGAAGGTTTCACTCCAGTCAAGTCTCTTGGGTCAACGGCTTTCTCTTACATGATGATACCATCACCCAACATGCGCTTTCTTCACCCAAGTCCTCTTCAGCTTCCCACATGTTTAACTGCAGAATCACCTCCACTTGCTCACCTCCTTCACAGCAAAGGCTGTGCAATCCCCTTGTCTACCGGATTTGTTGTTTCAAAAGCTGTGCCTTCCATGAGAAAAGACTCGAGAATAAACGTGAAAGAAGAATGGCCATCAGTTCTCTCTGTAAGTCTCATAGACTATTATGGTGGTTATGACAACGCTCATGACAAAGTTCTTCAAGGAATCATGAAGCAAGGCGGTGGAGGGACCAAAGAAACTAGAGATTTTGAGGTTGAAAGCCATCTAATCCTTGAGTCAATTGCAGCAGAACTCCATGCTCTATCGTGGATGACTGTTAGTCCAGCATATCTGGATAGGCGGACTGCATTGCCATCTCACTGTGATGTGGTTCTCAGACTGAGTCGTCTGCTTCATTTTGCGGATAAAGAACGCTCCAGGCTACCAGATAAGTCGGGAGTTTGA

Protein:   MWTNVFRIGGLHHVSWFQFLPSEAELNPTSDTSSRAEQNDVATYLVLSSHLRLQKEGFLSTWTNSFVGPWDPSQGLYNPDEKIKLWLFLPGRHSSITDKAQAAVSKLRVVASGIWVAPGDSEEISVAFSQSLRNCIERALSGLSYMRFGDVFSKVSPQNEEYLRRGRLTVEFVFAATEEAVFVHVIVSAKNVRTLSSGDAERLSRSSLKNSSYRLPVIVSPHGMRGSLTGFCPNDLVKQVYFSSGNLRSSSGYIGLPPHAGSGSRLINGDHCYVEVTLGCCQNINDNTSQTNSTFAVNVPQTSVGSKDHRKGHPDIASMCEKKFIYPAEAVLVPILQSAFAKFSLKRFWLQNWIGPSLAGSSLFMHWAGDFDFFGSSGNKSDGFFEKNGYNSSGSSGNSSISSTSSASSGSGWRMTSRTGDLDADADSLTCNDDHPKLGSKRPRTGMAESFGQVGTANDQFGWDWDDDDDDDRGVGMDIQALLSEFGDFGDFFENDALPFGEPPGTAESHSLILPSDSADVGSSPMDTMDVSDQIVLPVGFSSFESFNPAPPIIDEGLIKSQEVLNNSVTSVSAPSNQMLSSSNSEFDHLMKAEAMMTFAPEYGAVEAPMSEISSTSFKSPYLPKSHKVESSNSRTSSYVYGPTPPATDSDGAVDKILLGSKAYIGNDGRTLYTKVEGRKGRYDKLPTLISDNNSKKEGVSQLKYSNYNASSAVKIVQGKKTDGISAVVSTLLSSKTLLATDVGSVMFQAFMYRMRHKAISSKHSSPVSLSRLSGNFFLNQVPNEPSSLTDNVSGRNEIYKKEVPTRIAGDFDGGMLDSHMSAPVGVWRTVSVPKTAKPASSPNIEAGSSLPHSSFSENSLLSYGQRQPLQELLDGIALLVQQATSFVDLALDSDCGDGPYGWLALEELWRRELSCGPSAGHAGCGGTLASCHSLDIAGVKLVDPLSAEVFPSSVITLLQSDIKTALKSAFGQSDGPLYVTDWCKGRNQSMDGVSISEGSTAESVLSEVSNAIDGGKGEESAQSQDIYSSELLRPTLFVLPSPSILVGYQDDWLKVSTNSLPHWEKAPFEPYALPKNMNYTVVCPDIDPLTSAAVDFFQQLGTVYETCRLGTHLPQILGNQMETDAGRLSSSGFVLLDCPQSMKIESNNTSLLGSLSDYFLSLSNGWNVNSYLKSLSKALKGLKLGSGLYTNQKEGSATPCMVVYIVCPFPDPSAVLRTVVESSIALGSGIKPDRDRRSLLNSQVARAFGSSAAVDEASISHIPVLSGFSVPKLVLQVVSVDSIFRITSPSFNELVILKDTAFSVYNKARRISRGMPNDAFLSSSLSNRSSSALASVNSISGIWKDCVSSRMTGSTHPRDGDIDGSIRTSSWDSSWQITRSGGVSCDSNRNGDFYINEEIFYLFEPLFILSEPGSVDRGVSPTFGGLGSESSKPIPEDGGRGSGLGVNSMEGTSSQGDASQVEGKAVPSLHCCYGWTEDWRWLVSIWTDARGELLDTHIFPFGGISSRQDTKGLQCLFVQVLQQGCQILQACSSPDSGSFKPRDFVITRIGSFFELEYLEWQKAIYTAGGPEIKKWPIQLRRSAPSGVATNSNGPSLQQHDLSLIQERASSTSTLYGSHSKPSTFVKGGMGHSAGRKQTMGGQTISGTPRGLFQWVHSISFASISLDHSLHFVLPAELVSPGGGQSSTGMSAANYIEGFTPVKSLGSTAFSYMMIPSPNMRFLHPSPLQLPTCLTAESPPLAHLLHSKGCAIPLSTGFVVSKAVPSMRKDSRINVKEEWPSVLSVSLIDYYGGYDNAHDKVLQGIMKQGGGGTKETRDFEVESHLILESIAAELHALSWMTVSPAYLDRRTALPSHCDVVLRLSRLLHFADKERSRLPDKSGV